Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs17200327 chr3:16500050 A/G 9.51E-5 289 25.62 45.47 9.35 KM Plot
KIRP rs17210696 chr13:45046432 T/C 1.48E-11 285 26.18 23.63 6.17 KM Plot
KIRP rs17319718 chr13:46975246 C/T 4.91E-7 289 24.8 37.87 23.23 KM Plot
KIRP rs17343205 chr10:43180761 T/C 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs17347902 chr10:43525303 G/C 4.08E-5 288 25.63 25.95 11.43 KM Plot
KIRP rs17347944 chr10:43525741 C/T 5.99E-5 286 25.67 26.4 11.43 KM Plot
KIRP rs17361668 chr11:102720344 A/T 7.76E-6 289 25.67 26.52 10.97 KM Plot
KIRP rs17368582 chr11:102738075 T/C 8.72E-6 287 25.7 26.83 10.97 KM Plot
KIRP rs17368659 chr11:102742761 G/T 9.17E-6 287 25.67 26.52 10.97 KM Plot
KIRP rs17368814 chr11:102748695 C/T 2.98E-6 289 16.45 25.88 25.7 KM Plot
KIRP rs17389184 chr1:209916789 C/T 2.95E-5 289 24.67 30.8 17.13 KM Plot
KIRP rs17418741 chr10:43087170 A/G 7.16E-5 288 25.4 27.47 11.43 KM Plot
KIRP rs17422287 chr10:88200863 G/C 1.08E-7 287 26.37 21.63 9.77 KM Plot
KIRP rs17428442 chr10:43220271 A/G 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs17431976 chr10:43477111 C/T 4.52E-5 289 25.7 25.5 11.43 KM Plot